Co-expression analysis

Gene ID Zm.1007.1.S1_at
Gene name stem 28 kDa glycoprotein
Homology with ArabidopsisSimilar to At4g29260: acid phosphatase class B family protein (HF=2e-6)
Module size 14 genes
NF 0.44
%ile 51.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7490.30.96Zm.1007.1.S1_atAY106317.1stem 28 kDa glycoprotein-2e-6At4g29260acid phosphatase class B family proteinO.I.H.G.S.X.
0.5976.10.96Zm.10432.1.A1_atAY111714.1Alkaline alpha galactosidase 1-2e+1At5g24105AGP41 (ARABINOGALACTAN-PROTEIN 41)O.I.H.G.S.X.
0.5571.60.97Zm.16324.1.A1_atCF032268hypothetical protein LOC100194392-5e-17At5g08160ATPK3O.I.H.G.S.X.
0.5369.10.96Zm.1788.1.A1_atAW447831amino acid transporter-like protein-7e-5At5g38820amino acid transporter family proteinO.I.H.G.S.X.
0.4961.90.97Zm.13112.2.S1_a_atAI714527--2e-7At5g63420emb2746 (embryo defective 2746)O.I.H.G.S.X.
0.4861.30.97ZmAffx.1004.1.A1_atAI881348--3e+0At3g32160unknown proteinO.I.H.G.S.X.
0.4352.80.97Zm.6047.1.A1_atCO530861hypothetical protein LOC100193183-3e-3At1g11650RNA-binding protein 45 (RBP45), putativeO.I.H.G.S.X.
0.4048.50.97Zm.1209.1.S1_atAY107780.13-oxoacyl-synthase III-9e-2At1g62640KAS III (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III)O.I.H.G.S.X.
0.3538.90.97Zm.6454.1.A1_atAY106137.1PP1/PP2A phosphatases pleiotropic regulator PRL1-9e-29At4g15900PRL1 (PLEIOTROPIC REGULATORY LOCUS 1)O.I.H.G.S.X.
0.3336.00.98Zm.13763.1.A1_atCF624710hypothetical protein LOC100279845-2e-4At4g386901-phosphatidylinositol phosphodiesterase-relatedO.I.H.G.S.X.
0.3131.60.97Zm.3808.1.S1_atCF010880low-molecular-weight cysteine-rich protein LCR68-5e+0At4g02850phenazine biosynthesis PhzC/PhzF family proteinO.I.H.G.S.X.
0.2928.10.97Zm.6649.1.S1_atCK370002hypothetical protein LOC100191356-8e-4At3g05290PNC1 (PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 1)O.I.H.G.S.X.
0.2828.10.97Zm.14354.1.S1_x_atCK37030340S ribosomal protein S29 /// 40S ribosomal protein S29-2e-11At4g3386540S ribosomal protein S29 (RPS29C)O.I.H.G.S.X.
0.2216.90.97Zm.4126.1.A1_atAY112344.1small nucleolar ribonucleoprotein complex subunit-1e+0At3g50440MES10 (METHYL ESTERASE 10)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.299.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
20.099.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
19.799.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
18.699.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.999.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.098.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.898.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.698.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.098.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.194.3GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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