Co-expression analysis

Gene ID	Zm.10033.1.A1_at
Gene name	hypothetical protein LOC100273858
Homology with Arabidopsis	Similar to At3g29130: unknown protein (HF=4e+0)
Module size	14 genes
NF	0.30
%ile	28.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.48	61.3	0.88	Zm.10033.1.A1_at	AW191078	hypothetical protein LOC100273858	-	4e+0	At3g29130	unknown protein	O.I.	H.G.	S.X.	Please select
0.54	69.8	0.93	ZmAffx.33.1.A1_at	AI657429	t-snare	-	2e-1	At4g00890	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.93	RPTR-Zm-U89963-1_x_at	RPTR-Zm-U89963-1	-	-			-	O.I.	H.G.	S.X.	Please select
0.49	61.9	0.92	ZmAffx.690.1.A1_at	AI737303	-	-	1e+1	At5g64040	PSAN	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.94	ZmAffx.609.1.S1_at	AI715037	-	-	3e+0	At2g26520	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	41.3	0.93	Zm.16180.1.A1_at	AW091200	-	-	5e-2	At2g28440	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.95	Zm.13452.2.A1_at	AY105619.1	zinc transporter 4	-	5e-4	At3g12750	ZIP1 (ZINC TRANSPORTER 1 PRECURSOR)	O.I.	H.G.	S.X.	Please select
0.28	28.1	0.94	ZmAffx.19.1.A1_at	AI586648	PWWP domain containing protein	-	1e+1	At1g48745	unknown protein	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.94	Zm.10252.1.A1_at	AY108029.1	hypothetical protein LOC100279693	-	2e+0	At5g02750	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.95	ZmAffx.1055.1.S1_at	AI881878	hypothetical protein LOC100279811	-	5e-2	At4g01940	NFU1	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.95	Zm.9319.1.A1_at	CF627080	hypothetical protein LOC100216855	-	2e+0	At5g10000	ATFD4 (ferredoxin 4)	O.I.	H.G.	S.X.	Please select
0.19	12.8	0.94	Zm.10401.1.S1_at	CO524902	glyoxylate reductase	-	3e-12	At1g79870	oxidoreductase family protein	O.I.	H.G.	S.X.	Please select
0.16	9.4	0.94	Zm.1039.2.A1_at	CF384547	-	-	2e+0	At3g59270	syntaxin-related family protein	O.I.	H.G.	S.X.	Please select
0.14	7.7	0.93	Zm.6569.3.S1_at	BM382146	hypothetical protein LOC100274518	-	3e+0	At4g12340	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.8	98.6	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.3	98.5	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.9	98.3	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.6	98.1	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.4	98.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.7	97.9	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.4	97.5	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.2	97.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.1	97.4	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.5	92.6	GSM320439	protocol: mRNA - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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