Co-expression analysis

Gene ID Zm.10011.1.A1_at
Gene name glycine-rich protein GRP5
Homology with ArabidopsisSimilar to At4g25950: VATG3 (vacuolar ATP synthase G3) (HF=5e+0)
Module size 27 genes
NF 0.33
%ile 32.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9399.30.66Zm.10011.1.A1_atBM331860glycine-rich protein GRP5-5e+0At4g25950VATG3 (vacuolar ATP synthase G3)O.I.H.G.S.X.
0.4658.40.83ZmAffx.357.1.A1_atAI670544--6e-1At5g67070RALFL34 (ralf-like 34)O.I.H.G.S.X.
0.4455.70.90Zm.704.1.S1_atU15781.1xyloglucan endotransglycosylase homolog1-3e-6At5g57550XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)O.I.H.G.S.X.
0.4251.30.83ZmAffx.257.1.S1_atAI670300--8e-1At5g66090unknown proteinO.I.H.G.S.X.
0.4251.30.81Zm.10034.1.S1_atCK370678cyclin-dependent kinase inhibitor 2-3e+0At5g35603unknown proteinO.I.H.G.S.X.
0.4048.50.79Zm.8915.2.S1_a_atCD526531UDP-sugar pyrophospharylase-3e-1Atmg00370-O.I.H.G.S.X.
0.4048.50.82ZmAffx.185.1.A1_atAI668356--1e+1At5g58220TTL (Transthyretin-Like protein)O.I.H.G.S.X.
0.3945.60.84Zm.6492.1.A1_atAI692087Hypothetical protein LOC100216988-5e-1At4g19512unknown proteinO.I.H.G.S.X.
0.3538.90.80ZmAffx.451.1.A1_atAI677139--8e-1At5g66740unknown proteinO.I.H.G.S.X.
0.3437.20.83ZmAffx.33.1.S1_atAI657429--2e-1At4g00890proline-rich family proteinO.I.H.G.S.X.
0.3336.00.80ZmAffx.429.1.A1_atAI676885--8e-1At5g20150SPX1 (SPX DOMAIN GENE 1)O.I.H.G.S.X.
0.3233.40.89Zm.1638.1.S1_atCF628096hypothetical protein LOC100192625-2e-15At4g2709060S ribosomal protein L14 (RPL14B)O.I.H.G.S.X.
0.3029.80.79Zm.15829.1.A1_atAY103873.1nascent polypeptide-associated complex alpha subunit-like protein-5e-35At3g12390nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeO.I.H.G.S.X.
0.3029.80.81Zm.15871.1.A1_atBM341135--2e+1At5g12140ATCYS1 (A. thaliana cystatin-1)O.I.H.G.S.X.
0.2928.10.87ZmAffx.27.1.A1_atAI622299Hypothetical protein LOC100191746-3e+0At5g46350WRKY8O.I.H.G.S.X.
0.2928.10.91Zm.2856.1.A1_atAW076433BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-9e-34At2g35620FEI2 (FEI 2)O.I.H.G.S.X.
0.2928.10.78ZmAffx.270.1.A1_atAI670398--8e-1At4g02730transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.2828.10.90RPTR-Zm-J01347-2_atRPTR-Zm-J01347-2---O.I.H.G.S.X.
0.2828.10.90ZmAffx.782.1.S1_atAI759014--8e-1At2g46455-O.I.H.G.S.X.
0.2622.70.91Zm.16892.3.S1_a_atCB281906calmodulin binding protein-5e-3At3g22190IQD5 (IQ-domain 5)O.I.H.G.S.X.
0.2622.70.84ZmAffx.117.1.S1_atAI665629--8e+0At3g12835unknown proteinO.I.H.G.S.X.
0.2622.70.84Zm.15903.2.A1_atBM266872--2e-11At3g10340PAL4 (Phenylalanine ammonia-lyase 4)O.I.H.G.S.X.
0.2521.30.90Zm.3966.1.A1_atAI795713--5e-2At1g563103'-5' exonuclease domain-containing proteinO.I.H.G.S.X.
0.2521.30.85Zm.8981.1.S1_atBM378421early responsive to dehydration protein-6e-2At1g30360ERD4 (early-responsive to dehydration 4)O.I.H.G.S.X.
0.2419.80.84ZmAffx.544.1.S1_atAI712096--3e+0At1g04800glycine-rich proteinO.I.H.G.S.X.
0.2318.60.80ZmAffx.43.1.S1_atAI664875--1e-5At5g06830unknown proteinO.I.H.G.S.X.
0.1811.60.76ZmAffx.914.1.S1_atAI770970protein kinase APK1A-2e-20At5g13160PBS1 (avrPphB susceptible 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.098.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.697.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.194.3GSM206313Upper pulvinus 5 min total RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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