Co-expression analysis

Gene ID	TaAffx.99224.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g65960: unknown protein (HF=3e-1)
Module size	6 genes
NF	0.06
%ile	15.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.0	0.83	TaAffx.99224.1.A1_at	CK209191	-	-	3e-1	At5g65960	unknown protein	O.I.	H.G.	S.X.	Please select
0.80	92.2	0.86	TaAffx.38265.5.S1_at	CA708043	-	-	9e-1	At4g22550	phosphatidic acid phosphatase-related / PAP2-related	O.I.	H.G.	S.X.	Please select
0.07	8.6	0.93	TaAffx.38265.3.A1_at	CD927114	-	-	3e-1	At5g40800	unknown protein	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.94	Ta.8506.1.S1_x_at	CN009358	-	-	3e+0	At4g18280	glycine-rich cell wall protein-related	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.93	Ta.8506.1.S1_at	CN009358	-	-	3e+0	At4g18280	glycine-rich cell wall protein-related	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.92	Ta.2944.1.S1_at	BJ207743	-	-	4e+0	At4g35610	zinc finger (C2H2 type) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.2	99.2	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
10.0	99.1	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
9.7	99.1	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
7.8	98.7	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
6.0	98.0	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
5.4	97.7	GSM111193	genotype F38a developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
5.3	97.6	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
5.3	97.6	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
5.0	97.4	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
4.6	97.0	GSM246384	SB165_Stem_ rep1_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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