Co-expression analysis

Gene ID TaAffx.99206.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g21610: LOL2 (LSD ONE LIKE 2) (HF=3e-1)
Module size 9 genes
NF 0.49
%ile 75.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5779.20.94TaAffx.99206.1.S1_atCA727631--3e-1At4g21610LOL2 (LSD ONE LIKE 2)O.I.H.G.S.X.
0.7188.00.95TaAffx.38217.1.S1_x_atBJ244494--7e+0At5g11690ATTIM17-3O.I.H.G.S.X.
0.5979.80.95Ta.11314.2.S1_x_atCA619157--4e+0At5g40500unknown proteinO.I.H.G.S.X.
0.5576.80.94Ta.5523.2.S1_a_atBJ243328--4e+0At5g47600heat shock protein-relatedO.I.H.G.S.X.
0.5273.70.94TaAffx.38815.1.A1_atBJ216899--1e+0At5g24170-O.I.H.G.S.X.
0.5072.40.95TaAffx.38217.1.S1_atBJ244494--7e+0At5g11690ATTIM17-3O.I.H.G.S.X.
0.4260.90.95TaAffx.78517.1.S1_atCA731451--4e+0At2g25720unknown proteinO.I.H.G.S.X.
0.4159.60.95TaAffx.113756.1.S1_atCA605644--1e-3At5g04250OTU-like cysteine protease family proteinO.I.H.G.S.X.
0.2735.60.95Ta.30411.1.S1_atCK209297--5e+0At5g62280unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.898.9GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
8.598.9GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
7.998.7GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.397.6GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.297.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.997.3GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.797.1GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.596.9GSM324490Si+ B- rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
4.396.7GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.795.8GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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