Co-expression analysis

Gene ID	TaAffx.98504.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g54510: ATNEK1 (ARABIDOPSIS THALIANA NIMA-RELATED SERINE/THREONINE KINASE 1) (HF=4e-12)
Module size	6 genes
NF	0.15
%ile	28.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	0.91	TaAffx.98504.1.S1_at	BG607257	-	-	4e-12	At1g54510	ATNEK1 (ARABIDOPSIS THALIANA NIMA-RELATED SERINE/THREONINE KINASE 1)	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.94	TaAffx.120000.2.S1_s_at	CA639154	Tousled-like protein kinase	-	1e-12	At5g20930	TSL (TOUSLED)	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.94	TaAffx.120000.1.S1_at	BJ248340	tousled-like protein kinase	-	7e-25	At5g20930	TSL (TOUSLED)	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.93	TaAffx.38672.1.S1_at	BJ222022	-	-	6e-2	At1g64625	transcription factor	O.I.	H.G.	S.X.	Please select
0.11	12.4	0.93	Ta.6542.1.A1_at	BJ274437	-	-	1e-11	At2g37050	kinase	O.I.	H.G.	S.X.	Please select
0.07	8.6	0.91	TaAffx.106349.1.S1_at	CA723811	-	-	1e+0	At1g67080	ABA4 (abscisic acid (ABA)-deficient 4)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.1	98.1	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
4.8	97.2	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
4.4	96.8	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
4.4	96.8	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.2	96.6	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
3.8	96.0	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
3.8	96.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.8	96.0	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.8	96.0	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
3.7	95.8	GSM298074	Crown tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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