Co-expression analysis

Gene ID TaAffx.98378.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g37035: unknown protein (HF=7e-2)
Module size 6 genes
NF 0.34
%ile 54.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.96TaAffx.98378.1.S1_atCA735372--7e-2At2g37035unknown proteinO.I.H.G.S.X.
0.3854.70.98Ta.21086.2.S1_x_atBJ307886--3e-16At2g20930-O.I.H.G.S.X.
0.3142.70.98Ta.9607.1.A1_a_atCA708572--5e+0At5g2451060s acidic ribosomal protein P1, putativeO.I.H.G.S.X.
0.2939.20.98Ta.4770.1.S1_x_atCK162188--4e-1At2g28105-O.I.H.G.S.X.
0.2329.00.98Ta.822.2.S1_x_atCD901100--1e-90At4g40040histone H3.2O.I.H.G.S.X.
0.1314.60.98Ta.7608.1.S1_x_atCD452795--7e-5At2g17200ubiquitin family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.698.7GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
7.098.5GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.897.9GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.496.8GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.395.0GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.893.6GSM139924Anther telophaseI-telophaseII rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.592.5GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.592.5GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.592.5GSM324490Si+ B- rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
2.592.5GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.250002.1.S1_s_at, orthologous to the query gene, TaAffx.98378.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7393.6PtpAffx.250002.1.S1_s_atAt2g37035hypothetical protein-3e+0At2g31180MYB14 (MYB DOMAIN PROTEIN 14)O.I.H.G.S.X.
0.6791.1PtpAffx.211230.1.S1_x_atAt2g37035hypothetical protein-4e-56Atcg00490-O.I.H.G.S.X.
0.6791.1PtpAffx.249.339.S1_atAt2g37035--3e+0At3g23420F-box family protein-relatedO.I.H.G.S.X.
0.6086.0PtpAffx.215329.1.S1_s_atAt2g37035hypothetical protein-3e+0At1g03700-O.I.H.G.S.X.
0.5582.2PtpAffx.216442.1.S1_s_atAt2g37035hypothetical protein-2e-111Atcg00490-O.I.H.G.S.X.
0.4471.9PtpAffx.222078.1.S1_x_atAt2g37035hypothetical protein-3e-98Atcg00490-O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Vitis_vinifera
Zea_mays



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