Co-expression analysis

Gene ID TaAffx.97935.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g20510: OPCL1 (OPC-8:0 COA LIGASE1) (HF=4e-4)
Module size 6 genes
NF 0.07
%ile 17.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7188.00.95TaAffx.97935.1.S1_atBQ801609--4e-4At1g20510OPCL1 (OPC-8:0 COA LIGASE1)O.I.H.G.S.X.
0.2532.10.96TaAffx.58767.1.S1_s_atCA616439--7e-5At2g43240nucleotide-sugar transmembrane transporter/ sugar:hydrogen symporterO.I.H.G.S.X.
0.078.60.96Ta.5224.1.S1_atBQ162436--1e-2At5g66250kinectin-relatedO.I.H.G.S.X.
0.078.60.96TaAffx.73632.1.A1_atBQ168793--1e+0At4g09010APX4 (ASCORBATE PEROXIDASE 4)O.I.H.G.S.X.
0.045.80.96Ta.27044.1.S1_atBJ263152--2e-1At1g67070DIN9 (DARK INDUCIBLE 9)O.I.H.G.S.X.
0.034.70.95TaAffx.38015.1.A1_atCA653610--2e+1At5g49015Expressed proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.199.5GSM314258tissue type: germinating seed, embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
11.099.3GSM314259tissue type: germinating seed, embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
10.799.2GSM314257tissue type: germinating seed, embryo - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
9.999.1GSM138162genotype E5 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
5.998.0GSM314274tissue type: floral bracts, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.897.9GSM298082Leaf tissue of Solstice at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.697.8GSM324490Si+ B- rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
5.497.7GSM314273tissue type: floral bracts, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.397.6GSM138154genotype H5 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
5.197.5GSM298081Leaf tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage