Co-expression analysis

Gene ID TaAffx.96847.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g34540: CYP94D1 (HF=2e-5)
Module size 6 genes
NF 0.50
%ile 76.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.30.80TaAffx.96847.1.S1_atCK209860--2e-5At1g34540CYP94D1O.I.H.G.S.X.
0.5979.80.80Ta.5149.1.A1_atCK213896--3e-1At1g07690unknown proteinO.I.H.G.S.X.
0.5374.90.78TaAffx.132281.2.S1_atCK212051--6e+0At1g70700TIFY7O.I.H.G.S.X.
0.5072.40.88TaAffx.132281.2.S1_x_atCK212051--6e+0At1g70700TIFY7O.I.H.G.S.X.
0.3854.70.81Ta.7716.1.S1_atBJ322896--4e-1At1g12665-O.I.H.G.S.X.
0.2939.20.83TaAffx.63970.1.A1_atCK163758--6e+0At5g62500ATEB1B (END BINDING PROTEIN 1B)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
23.899.8GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
22.599.8GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
9.399.0GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
8.398.8GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
7.798.7GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
7.798.7GSM143521Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
6.998.4GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
5.197.5GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.697.0GSM314267tissue type: seedling, leaf - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.396.7GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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