Co-expression analysis

Gene ID TaAffx.9551.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g36410: unknown protein (HF=1e+0)
Module size 6 genes
NF 0.29
%ile 47.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.10.91TaAffx.9551.1.S1_atCA595241--1e+0At2g36410unknown proteinO.I.H.G.S.X.
0.6081.00.92TaAffx.79610.1.S1_atCA711937--9e-1At1g26762unknown proteinO.I.H.G.S.X.
0.6081.00.92TaAffx.51916.1.S1_atCA716507--3e+0At4g26010peroxidase, putativeO.I.H.G.S.X.
0.2735.60.92TaAffx.23406.1.S1_atCA735527--9e-4At3g53610ATRAB8O.I.H.G.S.X.
0.2329.00.92RPTR-Ta-L36849-1_atRPTR-Ta-L36849-1---O.I.H.G.S.X.
0.1213.30.92Ta.28142.2.S1_atCA644586--3e-1At5g4770060S acidic ribosomal protein P1 (RPP1C)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.099.7GSM143522Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
12.899.4GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
12.599.4GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
11.299.3GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
10.899.2GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.098.5GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.498.2GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.498.2GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.695.6GSM111236genotype F38b developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.294.8GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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