Co-expression analysis

Gene ID	TaAffx.9544.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g42680: myosin-related (HF=3e+0)
Module size	22 genes
NF	0.44
%ile	69.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.78	91.1	0.72	TaAffx.9544.1.S1_at	CA595442	-	-	3e+0	At1g42680	myosin-related	O.I.	H.G.	S.X.	Please select
0.68	86.5	0.90	Ta.10878.1.A1_at	BQ166737	-	-	2e-1	At4g39260	GR-RBP8	O.I.	H.G.	S.X.	Please select
0.58	79.2	0.89	TaAffx.65814.1.A1_at	BJ220196	-	-	2e+0	At4g33480	unknown protein	O.I.	H.G.	S.X.	Please select
0.54	75.5	0.85	Ta.28779.1.S1_s_at	BQ802240	-	-	5e+0	At1g05450	protease inhibitor/seed storage/lipid transfer protein (LTP)-related	O.I.	H.G.	S.X.	Please select
0.54	75.5	0.83	TaAffx.104481.1.S1_at	CB884225	-	-	4e+0	At5g16160	unknown protein	O.I.	H.G.	S.X.	Please select
0.54	75.5	0.83	Ta.2815.2.S1_at	CA600457	-	-	4e+0	At5g50950	fumarate hydratase, putative / fumarase, putative	O.I.	H.G.	S.X.	Please select
0.49	69.7	0.84	TaAffx.120493.1.A1_at	BJ216575	-	-	6e-2	At2g37600	60S ribosomal protein L36 (RPL36A)	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.94	TaAffx.119902.1.A1_at	BJ252893	-	-	4e+0	At4g26070	MEK1 (MAP KINASE/ ERK KINASE 1)	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.82	Ta.19152.1.S1_at	CA648007	-	-	2e+0	At3g11510	40S ribosomal protein S14 (RPS14B)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.84	Ta.3456.1.A1_at	BJ218997	-	-	4e+0	At2g42110	unknown protein	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.91	TaAffx.78762.1.S1_at	CA727652	-	-	2e+1	At5g17165	unknown protein	O.I.	H.G.	S.X.	Please select
0.42	60.9	0.83	TaAffx.65144.1.S1_at	CA593880	-	-	2e+0	At1g29970	RPL18AA (60S RIBOSOMAL PROTEIN L18A-1)	O.I.	H.G.	S.X.	Please select
0.41	59.6	0.91	TaAffx.65077.1.A1_at	BJ263404	-	-	4e+0	At3g17000	UBC32 (ubiquitin-conjugating enzyme 32)	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.92	Ta.3609.3.S1_a_at	BJ208086	-	-	5e-6	At1g62940	ACOS5 (ACYL-COA SYNTHETASE 5)	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.86	TaAffx.29542.1.S1_at	CA640664	-	-	1e-2	At5g13580	ABC transporter family protein	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.92	Ta.16282.1.S1_s_at	CA604074	-	-	9e-1	At4g02075	PIT1 (pitchoun 1)	O.I.	H.G.	S.X.	Please select
0.30	40.9	0.87	TaAffx.71941.1.A1_at	CK209030	-	-	1e+0	At4g14272	-	O.I.	H.G.	S.X.	Please select
0.30	40.9	0.87	Ta.19280.1.A1_at	CA649535	-	-	3e+0	At3g43160	MEE38 (maternal effect embryo arrest 38)	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.82	TaAffx.113964.1.S1_at	CA600594	-	-	7e-2	At1g79800	plastocyanin-like domain-containing protein	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.92	Ta.8315.1.A1_at	BQ161732	-	-	2e-1	At4g22000	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.93	Ta.16004.1.S1_at	CA593852	-	-	2e+0	Atmg00690	-	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.86	TaAffx.87092.1.S1_at	CA597138	-	-	6e+0	At1g52343	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.3	97.6	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.2	97.5	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
5.1	97.5	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.9	97.3	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
4.1	96.4	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.8	96.0	GSM298058	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.6	95.6	GSM298057	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.4	95.2	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.4	95.2	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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