Co-expression analysis

Gene ID TaAffx.95237.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g76890: - (HF=3e-13)
Module size 7 genes
NF 0.50
%ile 76.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5374.90.96TaAffx.95237.1.S1_atBE430275--3e-13At1g76890-O.I.H.G.S.X.
0.7188.00.96TaAffx.50801.1.S1_atCA608458--1e+0At2g41310ATRR3 (RESPONSE REGULATOR 3)O.I.H.G.S.X.
0.5576.80.96Ta.11488.1.S1_x_atCK155265--3e-24At3g51550FER (FERONIA)O.I.H.G.S.X.
0.4869.00.96Ta.14561.1.S1_atCA605612--3e-1At1g15885unknown proteinO.I.H.G.S.X.
0.4464.50.98Ta.11488.1.S1_s_atCK155265--3e-24At3g51550FER (FERONIA)O.I.H.G.S.X.
0.4058.40.96Ta.1865.2.S1_x_atCK152141--2e-2At2g29125RTFL2 (ROTUNDIFOLIA LIKE 2)O.I.H.G.S.X.
0.3448.10.96TaAffx.70539.1.A1_atBQ802325--2e-12At3g14230RAP2.2O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.697.0GSM298091Leaf tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.296.6GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.896.0GSM250914Tc_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.595.4GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.194.5GSM250902Tc_7dpi_inoculated_rep1GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.893.6GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.793.3GSM298078Leaf tissue of Solstice at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.692.9GSM298089Leaf tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.592.5GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.492.0GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage