Co-expression analysis

Gene ID	TaAffx.9482.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g40250: zinc finger (C3HC4-type RING finger) family protein (HF=7e-2)
Module size	6 genes
NF	0.90
%ile	99.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.96	TaAffx.9482.1.S1_at	CA597312	-	-	7e-2	At5g40250	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.83	93.4	0.94	TaAffx.70070.1.S1_at	AJ610583	-	-	6e+0	At5g12030	AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A)	O.I.	H.G.	S.X.	Please select
0.83	93.4	0.95	Ta.16030.1.S1_at	CA595441	-	-	1e+1	At5g19370	rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein	O.I.	H.G.	S.X.	Please select
0.83	93.4	0.96	TaAffx.110980.1.S1_at	CA650450	-	-	2e-1	At4g38840	auxin-responsive protein, putative	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.93	TaAffx.59721.1.S1_at	CA596343	-	-	1e+0	At2g45760	BAP2 (BON ASSOCIATION PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.93	TaAffx.59706.1.S1_at	CA596587	-	-	4e+0	At1g75190	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
26.8	99.8	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
24.5	99.8	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
23.0	99.8	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
21.2	99.7	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
21.0	99.7	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
19.7	99.7	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
13.9	99.5	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
11.0	99.3	GSM139933	Anther mature anthers rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.1	98.5	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.5	97.8	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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