Co-expression analysis

Gene ID TaAffx.93449.1.S1_at
Gene name
Homology with ArabidopsisSimilar to Atmg01010: - (HF=8e+0)
Module size 6 genes
NF 0.25
%ile 41.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.73TaAffx.93449.1.S1_atBJ210355--8e+0Atmg01010-O.I.H.G.S.X.
0.2939.20.98Ta.1342.2.S1_x_atBJ306875--4e-1At2g23090unknown proteinO.I.H.G.S.X.
0.2227.10.93TaAffx.106227.1.S1_atCA721834--3e+0At2g32890RALFL17 (RALF-LIKE 17)O.I.H.G.S.X.
0.2227.10.99Ta.1058.2.S1_x_atBJ254771S-adenosylmethionine decarboxylase precursor-3e-5At3g02470SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE)O.I.H.G.S.X.
0.1314.60.94TaAffx.80013.1.S1_atCA704301--1e+0At4g18335unknown proteinO.I.H.G.S.X.
0.1213.30.98Ta.5057.3.A1_atCK194001Profilin /// Profilin-2e-12At4g29350PFN2 (PROFILIN 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.299.3GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.697.8GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.597.8GSM298071Crown tissue of Paragon at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.297.5GSM111210genotype B11 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.996.1GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.595.4GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.495.2GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.395.0GSM111199genotype A77 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
2.994.0GSM246395SB69_Stem_ rep2_at anthesisGSE9767Genotypic differences in water soluble carbohydrate metabolism in stemLink to GEO
2.793.3GSM143506Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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