Co-expression analysis

Gene ID TaAffx.92983.1.S1_at
Gene name
Homology with ArabidopsisSimilar to Atmg00580: - (HF=1e-46)
Module size 6 genes
NF 0.02
%ile 5.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.84TaAffx.92983.1.S1_atBJ237288--1e-46Atmg00580-O.I.H.G.S.X.
0.1011.30.94Ta.5481.1.S1_atCK197361--5e-2At2g42390protein kinase C substrate, heavy chain-relatedO.I.H.G.S.X.
0.045.80.95TaAffx.37681.1.S1_atBJ274198--2e+0At5g36960unknown proteinO.I.H.G.S.X.
0.034.70.96TaAffx.29625.1.S1_atCA638741--8e+0At4g24026unknown proteinO.I.H.G.S.X.
0.012.40.94TaAffx.91839.1.S1_atBJ300576--1e+0At5g01810CIPK15 (CBL-INTERACTING PROTEIN KINASE 15)O.I.H.G.S.X.
0.012.40.94Ta.4517.2.S1_a_atBG904313--1e+0At3g48640unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.399.6GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
13.699.5GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
13.499.5GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
7.098.5GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
6.998.4GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
6.298.1GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.897.9GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.697.8GSM143497Jupateco_Lr34 (susceptible), mock inoculated basal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
5.197.5GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.097.4GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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