Co-expression analysis

Gene ID	TaAffx.92850.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g12830: auxin-responsive family protein (HF=4e+0)
Module size	6 genes
NF	0.04
%ile	11.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.76	TaAffx.92850.1.S1_at	BJ245056	-	-	4e+0	At3g12830	auxin-responsive family protein	O.I.	H.G.	S.X.	Please select
0.10	11.3	0.97	Ta.9772.2.S1_x_at	CA606107	-	-	4e-3	At4g29430	rps15ae (ribosomal protein S15A E)	O.I.	H.G.	S.X.	Please select
0.10	11.3	0.96	Ta.4932.2.S1_a_at	CD883564	-	-	7e-32	At5g22330	RIN1 (RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1)	O.I.	H.G.	S.X.	Please select
0.06	7.6	0.92	Ta.5793.2.S1_at	CK161475	-	-	6e-14	At5g55230	ATMAP65-1 (MICROTUBULE-ASSOCIATED PROTEINS 65-1)	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.96	Ta.4005.2.S1_s_at	CA592974	-	-	1e+0	At1g27435	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.93	Ta.4838.1.S1_a_at	BJ267506	-	-	5e+0	At3g21640	TWD1 (TWISTED DWARF 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.7	97.9	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.4	96.8	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
4.2	96.6	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
4.1	96.4	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.7	95.8	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
3.1	94.5	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.1	94.5	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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