Co-expression analysis

Gene ID TaAffx.91903.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At4g13770: CYP83A1 (CYTOCHROME P450 83A1) (HF=6e-2)
Module size 19 genes
NF 0.10
%ile 22.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.10.70TaAffx.91903.1.A1_atBJ294119--6e-2At4g13770CYP83A1 (CYTOCHROME P450 83A1)O.I.H.G.S.X.
0.3549.80.77TaAffx.114090.1.S1_atCA598892--4e+0At5g28310oxidoreductase-relatedO.I.H.G.S.X.
0.3346.90.85Ta.3867.3.S1_x_atCA604296--4e-3At4g26850VTC2 (vitamin c defective 2)O.I.H.G.S.X.
0.2939.20.80Ta.14740.1.S1_atCA681282--5e+0At4g38860auxin-responsive protein, putativeO.I.H.G.S.X.
0.2735.60.97Ta.3867.3.S1_a_atCA604296--4e-3At4g26850VTC2 (vitamin c defective 2)O.I.H.G.S.X.
0.2633.60.93Ta.3867.1.S1_atCA653984--4e-28At4g26850VTC2 (vitamin c defective 2)O.I.H.G.S.X.
0.2633.60.94Ta.28103.1.S1_s_atCA613215--3e-1At4g26850VTC2 (vitamin c defective 2)O.I.H.G.S.X.
0.2532.10.85Ta.3853.2.S1_atBJ248397--4e-1At5g27730unknown proteinO.I.H.G.S.X.
0.2024.00.72Ta.18362.1.A1_atAJ612031--6e+0At5g38420ribulose bisphosphate carboxylase small chain 2B / RuBisCO small subunit 2B (RBCS-2B) (ATS2B)O.I.H.G.S.X.
0.1922.40.91Ta.5633.2.S1_atBG904409--5e+0At1g17235RTFL11 (ROTUNDIFOLIA LIKE 11)O.I.H.G.S.X.
0.1821.00.87TaAffx.132274.1.A1_atCK211207--5e+0At5g04890RTM2 (RESTRICTED TEV MOVEMENT 2)O.I.H.G.S.X.
0.1719.80.90Ta.3853.1.A1_atBJ254548--4e+0At1g25330basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.1517.10.83Ta.13134.1.A1_atBQ170823--2e-1At3g49570LSU3 (RESPONSE TO LOW SULFUR 3)O.I.H.G.S.X.
0.1314.60.85Ta.12666.1.S1_atBI479961--1e+0At5g56950NAP1O.I.H.G.S.X.
0.1112.40.85Ta.12091.2.S1_a_atCA664424--2e+1At5g08360unknown proteinO.I.H.G.S.X.
0.1112.40.88Ta.14417.1.S1_atBJ322545--4e-6At4g21990APR3 (APS REDUCTASE 3)O.I.H.G.S.X.
0.078.60.82Ta.11265.1.S1_atBQ169733--3e+0At5g44610MAP18 (Microtubule-associated Protein 18)O.I.H.G.S.X.
0.078.60.86TaAffx.83398.1.S1_atCA658041--1e-2At3g04030myb family transcription factorO.I.H.G.S.X.
0.023.60.82TaAffx.57864.1.S1_atCA624427--4e+0At5g41680protein kinase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.699.6GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
4.797.1GSM324491Si+ B- rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
4.496.8GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.296.6GSM324485Si- B- rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
3.896.0GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.795.8GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.795.8GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.695.6GSM324490Si+ B- rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
3.695.6GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.695.6GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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