Co-expression analysis

Gene ID TaAffx.9004.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g05160: leucine-rich repeat transmembrane protein kinase, putative (HF=1e-6)
Module size 6 genes
NF 0.14
%ile 26.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.84TaAffx.9004.1.S1_atCA616522--1e-6At5g05160leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.2633.60.98Ta.4884.1.A1_atBJ261376--5e-4At5g50860protein kinase family proteinO.I.H.G.S.X.
0.1719.80.97Ta.4932.1.A1_x_atBJ274109--8e-2At1g12890AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.1213.30.96Ta.10714.1.S1_atBQ166344--6e-1At4g04780MED21 (MEDIATOR 21)O.I.H.G.S.X.
0.067.60.98Ta.13936.1.S1_s_atCK209261--2e-1At3g10260reticulon family proteinO.I.H.G.S.X.
0.056.70.98TaAffx.33515.2.A1_x_atCD926752--3e-1At3g52380CP33O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.199.6GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
11.599.3GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
11.099.3GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.897.2GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.697.0GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.496.8GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.396.7GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.296.6GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.096.3GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.395.0GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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