Co-expression analysis

Gene ID	TaAffx.87119.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g58110: ATPase activator/ chaperone binding (HF=6e+0)
Module size	7 genes
NF	0.59
%ile	84.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.0	0.91	TaAffx.87119.1.S1_at	BF482631	-	-	6e+0	At5g58110	ATPase activator/ chaperone binding	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.90	TaAffx.87119.1.S1_x_at	BF482631	-	-	6e+0	At5g58110	ATPase activator/ chaperone binding	O.I.	H.G.	S.X.	Please select
0.61	82.0	0.92	Ta.16082.1.A1_at	CA624333	WRKY transcription factor	-	5e-1	At3g06780	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.94	Ta.16082.2.S1_x_at	CK211295	-	-	2e+0	At2g32100	OFP16 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.94	Ta.16082.2.S1_at	CK211295	-	-	2e+0	At2g32100	OFP16 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16)	O.I.	H.G.	S.X.	Please select
0.48	69.0	0.91	TaAffx.129081.2.S1_s_at	CA608630	-	-	2e-2	At4g32714	SCRL25 (SCR-Like 25)	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.93	Ta.29512.2.S1_x_at	CA741393	-	-	3e-1	At1g36095	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.4	98.2	GSM143523	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.8	97.9	GSM143508	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.0	97.4	GSM143509	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.0	97.4	GSM143511	Thatcher_Lr34 (resistant), mock inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.5	96.9	GSM143525	Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.3	96.7	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.2	96.6	GSM143521	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.1	96.4	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.9	96.1	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM138188	genotype F38a developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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