Co-expression analysis

Gene ID	TaAffx.87003.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At4g19150: ankyrin repeat family protein (HF=4e-3)
Module size	6 genes
NF	0.45
%ile	70.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.97	TaAffx.87003.1.S1_s_at	CA597427	-	-	4e-3	At4g19150	ankyrin repeat family protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.97	Ta.7506.2.S1_a_at	BJ267303	-	-	5e-15	At1g27650	ATU2AF35A	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.98	Ta.5355.1.S1_at	BJ286607	-	-	2e+0	At5g55565	-	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.97	Ta.8142.1.S1_at	BQ752849	-	-	3e-15	At1g61620	phosphoinositide binding	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.97	Ta.2207.2.S1_a_at	CA612248	-	-	5e-25	At5g05780	RPN8A (RP NON-ATPASE SUBUNIT 8A)	O.I.	H.G.	S.X.	Please select
0.16	18.2	0.97	Ta.536.1.S1_at	BE605196	-	-	8e+0	At5g35735	auxin-responsive family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.2	98.5	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
7.1	98.5	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
7.0	98.5	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
6.9	98.4	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
4.5	96.9	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
4.2	96.6	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.9	96.1	GSM314258	tissue type: germinating seed, embryo - rep2	GSE12508	Transcription patterns during wheat development
3.1	94.5	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM314259	tissue type: germinating seed, embryo - rep3	GSE12508	Transcription patterns during wheat development
3.0	94.3	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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