Co-expression analysis

Gene ID TaAffx.86665.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g14840: leucine-rich repeat family protein / protein kinase family protein (HF=2e+0)
Module size 8 genes
NF 0.13
%ile 25.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5273.70.90TaAffx.86665.1.S1_atCA642779--2e+0At3g14840leucine-rich repeat family protein / protein kinase family proteinO.I.H.G.S.X.
0.2939.20.91TaAffx.69855.1.S1_atAJ615131--2e+1At5g61412unknown proteinO.I.H.G.S.X.
0.1922.40.92Ta.3164.3.S1_atCA665172--2e-2At2g22670IAA8O.I.H.G.S.X.
0.1314.60.91Ta.11414.3.S1_atBQ609275--3e-10At1g07930elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.1213.30.91Ta.7051.2.S1_atBJ314502--1e-9At1g64060ATRBOH F (ARABIDOPSIS THALIANA RESPIRATORY BURST OXIDASE PROTEIN F)O.I.H.G.S.X.
0.089.40.90Ta.28501.3.S1_a_atBJ234908--3e-4At4g20460NAD-dependent epimerase/dehydratase family proteinO.I.H.G.S.X.
0.089.40.91Ta.6450.1.A1_atBJ308677--4e+0At4g22940protein kinase family proteinO.I.H.G.S.X.
0.089.40.90Ta.8094.1.A1_atCD454907--1e+0At2g41430ERD15 (EARLY RESPONSIVE TO DEHYDRATION 15)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.599.1GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
5.197.5GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.897.2GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.797.1GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.596.9GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.596.9GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.596.9GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.396.7GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.196.4GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.096.3GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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