Co-expression analysis

Gene ID TaAffx.86408.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g64670: BDG1 (BODYGUARD1) (HF=4e-4)
Module size 6 genes
NF 0.55
%ile 81.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.30.90TaAffx.86408.1.S1_atCA608985--4e-4At1g64670BDG1 (BODYGUARD1)O.I.H.G.S.X.
0.6786.30.91Ta.5046.1.S1_atAY543535.1expansin EXPA9-3e-24At2g37640EXP3O.I.H.G.S.X.
0.5576.80.90TaAffx.59844.1.S1_s_atCA594538--3e+0At3g02310SEP2 (SEPALLATA 2)O.I.H.G.S.X.
0.5072.40.94Ta.6350.3.S1_a_atBJ235492calcium-dependent protein kinase /// calcium-dependent protein kinase-3e-7At1g35670ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2)O.I.H.G.S.X.
0.4058.40.91Ta.6350.2.S1_x_atAW448037calcium-dependent protein kinase-3e-4At1g35670ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2)O.I.H.G.S.X.
0.4058.40.91Ta.15929.2.S1_atCA501533--4e-3At5g59030COPT1 (copper transporter 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.299.4GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
11.799.3GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
11.299.3GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.296.6GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.296.6GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.296.6GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.196.4GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.996.1GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.795.8GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.695.6GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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