Co-expression analysis

Gene ID TaAffx.86216.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g18580: unknown protein (HF=1e+0)
Module size 6 genes
NF 0.44
%ile 68.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4666.80.85TaAffx.86216.1.S1_atCA613951--1e+0At4g18580unknown proteinO.I.H.G.S.X.
0.6786.30.89Ta.578.1.S1_atBE489213--9e-1At3g48185unknown proteinO.I.H.G.S.X.
0.5072.40.88Ta.6578.3.A1_atBJ308193--1e+0At2g31200ADF6 (ACTIN DEPOLYMERIZING FACTOR 6)O.I.H.G.S.X.
0.4666.80.88Ta.1391.2.S1_atCK211679--9e-11At2g24090ribosomal protein L35 family proteinO.I.H.G.S.X.
0.3244.40.90Ta.17974.1.A1_atCA623388--4e-11At1g56045ribosomal protein L41 family proteinO.I.H.G.S.X.
0.2227.10.88TaAffx.83608.1.S1_atCA655505--4e+0At4g10390protein kinase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.899.7GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
13.799.5GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
13.499.5GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
13.399.5GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
6.298.1GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.097.4GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.596.9GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.396.7GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
4.096.3GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.795.8GSM246394SB69_Stem_ rep1_at anthesisGSE9767Genotypic differences in water soluble carbohydrate metabolism in stemLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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