Co-expression analysis

Gene ID TaAffx.86181.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g59330: anthocyanin-related membrane protein family (HF=3e+0)
Module size 34 genes
NF 0.38
%ile 60.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9498.90.96TaAffx.86181.1.S1_atCA615052--3e+0At3g59330anthocyanin-related membrane protein familyO.I.H.G.S.X.
0.5576.80.98Ta.7503.1.S1_atBJ296010--5e-2At2g16015unknown proteinO.I.H.G.S.X.
0.5273.70.96Ta.6999.1.A1_atBJ309757--2e+0At1g16880uridylyltransferase-relatedO.I.H.G.S.X.
0.5173.00.97Ta.25628.1.S1_x_atCA638117--5e-5At5g61770PPAN (PETER PAN-LIKE PROTEIN)O.I.H.G.S.X.
0.4969.70.97Ta.3396.1.A1_atBJ211165--1e+1At5g43430ETFBETAO.I.H.G.S.X.
0.4869.00.96TaAffx.128755.1.S1_atBQ743665--2e+0At2g47690NADH-ubiquinone oxidoreductase-relatedO.I.H.G.S.X.
0.4767.90.97Ta.19090.1.S1_atCA647059--1e+1At5g42965nucleic acid binding / ribonuclease HO.I.H.G.S.X.
0.4767.90.97Ta.28393.2.S1_x_atCK195651--2e-27At3g20050ATTCP-1O.I.H.G.S.X.
0.4565.20.97TaAffx.15928.1.A1_atBG904657--1e+1At5g50790nodulin MtN3 family proteinO.I.H.G.S.X.
0.4362.20.97TaAffx.39377.1.A1_atBG907838--7e+0At5g50480NF-YC6 (NUCLEAR FACTOR Y, SUBUNIT C6)O.I.H.G.S.X.
0.4159.60.96Ta.687.1.S1_atBJ249475--3e-12At5g39900GTP binding / GTPase/ translation elongation factorO.I.H.G.S.X.
0.4159.60.96Ta.30368.1.A1_atCK205657--3e-1At5g59000zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4058.40.97Ta.28475.1.A1_atCA722655--4e+0At2g03290protein transmembrane transporterO.I.H.G.S.X.
0.4058.40.97Ta.9787.1.S1_a_atCK171633--6e-65At1g80410EMB2753 (EMBRYO DEFECTIVE 2753)O.I.H.G.S.X.
0.3956.10.97Ta.14546.1.S1_x_atCK157902--3e+0At5g55610unknown proteinO.I.H.G.S.X.
0.3956.10.96Ta.7508.1.S1_atBF484771--3e-3At2g40660tRNA-binding region domain-containing proteinO.I.H.G.S.X.
0.3956.10.97Ta.12283.1.A1_atCD868445--7e+0At5g60890MYB34 (MYB DOMAIN PROTEIN 34)O.I.H.G.S.X.
0.3854.70.98Ta.6563.1.A1_x_atBJ263201--3e-8At2g06990HEN2 (hua enhancer 2)O.I.H.G.S.X.
0.3753.00.97Ta.9787.2.S1_a_atCA694380--1e+0At1g18290unknown proteinO.I.H.G.S.X.
0.3651.90.96Ta.3096.1.S1_atCA746014--3e+0At3g46230ATHSP17.4O.I.H.G.S.X.
0.3651.90.97TaAffx.34687.1.S1_atBJ307946--4e-6At3g16840ATP binding / ATP-dependent helicase/ helicase/ nucleic acid bindingO.I.H.G.S.X.
0.3651.90.96Ta.6498.1.A1_atBJ228594--1e+0At3g45285-O.I.H.G.S.X.
0.3549.80.97Ta.20442.2.S1_atBJ228354--4e-1At2g40360transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.3142.70.97Ta.3128.2.A1_a_atBJ231772--1e+0At5g19800hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.3142.70.96TaAffx.4182.1.S1_atBJ230530--4e+0At5g59990-O.I.H.G.S.X.
0.2939.20.97Ta.8993.1.S1_atBJ216499--7e+0At5g27889unknown proteinO.I.H.G.S.X.
0.2839.20.98Ta.28393.1.S1_x_atBG607691--1e-37At3g20050ATTCP-1O.I.H.G.S.X.
0.2839.20.97Ta.20442.1.A1_atBJ231438--1e-10At2g40360transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.2735.60.96Ta.16166.1.S1_atCA601819--6e-1At5g20120unknown proteinO.I.H.G.S.X.
0.2633.60.97Ta.7092.1.A1_a_atCD492186--2e-10At5g15810N2,N2-dimethylguanosine tRNA methyltransferase family proteinO.I.H.G.S.X.
0.2633.60.97Ta.7343.1.S1_atCD939192--7e-1At2g19680mitochondrial ATP synthase g subunit family proteinO.I.H.G.S.X.
0.2227.10.97Ta.4239.1.A1_atCD914880--2e+0At5g53120SPDS3 (SPERMIDINE SYNTHASE 3)O.I.H.G.S.X.
0.2125.50.98Ta.23800.1.S1_atCA647644--3e-4At1g05910cell division cycle protein 48-related / CDC48-relatedO.I.H.G.S.X.
0.1719.80.97Ta.7537.1.S1_atCK199057--7e-5At2g16940RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.097.4GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.296.6GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
4.096.3GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.094.3GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
2.893.6GSM314253tissue type: germinating seed, coleoptile - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
2.692.9GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
2.692.9GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.592.5GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.492.0GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
2.492.0GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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