Co-expression analysis

Gene ID TaAffx.85981.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g75630: AVA-P4 (HF=1e-56)
Module size 17 genes
NF 0.36
%ile 58.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6483.60.91TaAffx.85981.2.S1_atCA625845--1e-56At1g75630AVA-P4O.I.H.G.S.X.
0.6182.00.92Ta.5681.1.S1_x_atCA605111--1e-4At2g41420proline-rich family proteinO.I.H.G.S.X.
0.5779.20.94Ta.3083.2.A1_atBJ254365--4e+0At3g05602unknown proteinO.I.H.G.S.X.
0.4464.50.95TaAffx.38268.1.A1_atBJ242361--1e+0At1g21326VQ motif-containing proteinO.I.H.G.S.X.
0.4159.60.93TaAffx.106823.1.S1_x_atCA710938--4e+0At5g55570unknown proteinO.I.H.G.S.X.
0.4058.40.94Ta.14479.3.S1_x_atCA630294--7e-18At2g05830eukaryotic translation initiation factor 2B family protein / eIF-2B family proteinO.I.H.G.S.X.
0.3651.90.94Ta.3478.3.S1_x_atCA637826--2e-11At1g69670CUL3B (CULLIN 3B)O.I.H.G.S.X.
0.3651.90.94Ta.2138.2.S1_atCA632124--1e+0At1g55840SEC14 cytosolic factor (SEC14) / phosphoglyceride transfer proteinO.I.H.G.S.X.
0.3448.10.93Ta.3607.2.S1_atCA695720--7e-5At5g27430signal peptidase subunit family proteinO.I.H.G.S.X.
0.3346.90.93TaAffx.30610.1.S1_atCA623663--1e+1At5g60890MYB34 (MYB DOMAIN PROTEIN 34)O.I.H.G.S.X.
0.3346.90.94TaAffx.34241.2.S1_x_atCA722326--4e+0At5g51960-O.I.H.G.S.X.
0.3040.90.94Ta.14146.3.S1_x_atCA697368--2e+1At5g24313unknown proteinO.I.H.G.S.X.
0.2939.20.95TaAffx.34241.2.S1_atCA722326--4e+0At5g51960-O.I.H.G.S.X.
0.2633.60.94TaAffx.128510.16.S1_atCA643650--3e+0At4g27310zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.2633.60.94Ta.1472.1.A1_atBE430276--9e-1At1g66540cytochrome P450, putativeO.I.H.G.S.X.
0.1922.40.94TaAffx.57555.1.S1_atCA618738--2e+1At5g67600unknown proteinO.I.H.G.S.X.
0.1517.10.92Ta.1679.3.S1_atCA610132--3e-1At5g45590unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.298.8GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.198.5GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
7.098.5GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
5.897.9GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.497.7GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.297.5GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.097.4GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.997.3GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.596.9GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.996.1GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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