Co-expression analysis

Gene ID TaAffx.85969.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g26780: catalytic (HF=7e-2)
Module size 6 genes
NF 0.69
%ile 92.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.94TaAffx.85969.1.S1_atCA618026--7e-2At3g26780catalyticO.I.H.G.S.X.
0.8393.40.95TaAffx.26416.1.S1_atCA689143--4e+1At5g01350unknown proteinO.I.H.G.S.X.
0.6081.00.95TaAffx.121565.1.S1_atCA650791--1e+0At4g09530auxin-responsive family proteinO.I.H.G.S.X.
0.5576.80.95TaAffx.122081.2.S1_atCA723648--3e+0At5g64800CLE21 (CLAVATA3/ESR-RELATED 21)O.I.H.G.S.X.
0.5576.80.95TaAffx.111613.1.S1_atCA636910--9e-1At3g57670NTT (NO TRANSMITTING TRACT)O.I.H.G.S.X.
0.3346.90.95TaAffx.81077.1.S1_s_atCA732020--5e-3At3g20900unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
29.699.8GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
7.498.6GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.597.8GSM111241genotype F82 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
5.597.8GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.197.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.197.5GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.997.3GSM111185genotype C22 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
4.596.9GSM138164genotype D15 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
4.296.6GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.196.4GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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