Co-expression analysis

Gene ID TaAffx.85950.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g10380: SEC8 (SUBUNIT OF EXOCYST COMPLEX 8) (HF=9e-3)
Module size 8 genes
NF 0.42
%ile 66.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5374.90.96TaAffx.85950.2.S1_atCA661564--9e-3At3g10380SEC8 (SUBUNIT OF EXOCYST COMPLEX 8)O.I.H.G.S.X.
0.5576.80.97Ta.9654.3.S1_atCA624698--4e+0At1g61150-O.I.H.G.S.X.
0.5072.40.97Ta.23136.3.S1_a_atCA640653--2e-2At4g18450ethylene-responsive factor, putativeO.I.H.G.S.X.
0.4464.50.97TaAffx.32242.1.S1_atCA598327--4e+0At5g35320unknown proteinO.I.H.G.S.X.
0.4260.90.97TaAffx.129138.1.S1_s_atCK171378--3e-44At1g59820ALA3 (Aminophospholipid ATPase3)O.I.H.G.S.X.
0.3448.10.97TaAffx.87642.1.S1_atCA639148--3e-13At2g47980SCC3 (SISTER-CHROMATID COHESION PROTEIN 3)O.I.H.G.S.X.
0.3142.70.97TaAffx.51193.1.S1_atCA729655--7e-5At1g27960ECT9 (evolutionarily conserved C-terminal region 9)O.I.H.G.S.X.
0.2939.20.97Ta.6692.3.S1_x_atCA699727--2e-1At1g65490unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.094.3GSM298064Crown tissue of Harnesk at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.793.3GSM298073Crown tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.793.3GSM298088Crown tissue of Solstice at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.793.3GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.592.5GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.592.5GSM298072Crown tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.492.0GSM138192genotype B33 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
2.492.0GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.492.0GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.492.0GSM298085Crown tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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