Co-expression analysis

Gene ID TaAffx.85934.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g28564: unknown protein (HF=2e+1)
Module size 10 genes
NF 0.26
%ile 42.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6483.60.92TaAffx.85934.1.S1_atCA618342--2e+1At4g28564unknown proteinO.I.H.G.S.X.
0.3040.90.93TaAffx.19275.2.S1_atCA677479--1e+0At3g06390integral membrane family proteinO.I.H.G.S.X.
0.3040.90.94Ta.6594.2.S1_atCA660418--4e+0At1g25300octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinO.I.H.G.S.X.
0.2735.60.94Ta.10343.3.S1_atCA598392--4e+0At2g39010PIP2E (PLASMA MEMBRANE INTRINSIC PROTEIN 2E)O.I.H.G.S.X.
0.2633.60.92TaAffx.27421.1.S1_atCA676955--4e+0At5g61590AP2 domain-containing transcription factor family proteinO.I.H.G.S.X.
0.2430.30.93Ta.7193.2.S1_atBG904530--3e+0At2g34690ACD11 (ACCELERATED CELL DEATH 11)O.I.H.G.S.X.
0.2329.00.93Ta.30655.1.A1_atBJ315986ibZm protein-1e+0At2g2045060S ribosomal protein L14 (RPL14A)O.I.H.G.S.X.
0.1922.40.93TaAffx.113218.1.S1_atCA617187--5e-3At5g42050-O.I.H.G.S.X.
0.1821.00.94TaAffx.54172.1.S1_atCA684890--2e+1At3g47980integral membrane HPP family proteinO.I.H.G.S.X.
0.1415.80.94TaAffx.99206.1.S1_atCA727631--3e-1At4g21610LOL2 (LSD ONE LIKE 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.298.8GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.398.6GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
6.898.4GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.497.7GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.596.9GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.896.0GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.695.6GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
3.695.6GSM143525Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.595.4GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
3.395.0GSM298079Leaf tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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