Co-expression analysis

Gene ID	TaAffx.8533.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g21230: 4CL5 (4-coumarate:CoA ligase 5) (HF=4e-3)
Module size	6 genes
NF	0.04
%ile	13.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.84	TaAffx.8533.2.S1_at	CA627108	-	-	4e-3	At3g21230	4CL5 (4-coumarate:CoA ligase 5)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.94	Ta.28579.2.S1_at	CA611367	-	-	4e+0	At5g67580	TRB2	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.94	TaAffx.13785.2.S1_at	CA708591	-	-	7e-8	At2g34690	ACD11 (ACCELERATED CELL DEATH 11)	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.94	Ta.19361.2.S1_at	CA650802	-	-	5e-15	At4g12650	-	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.92	TaAffx.57555.1.S1_at	CA618738	-	-	2e+1	At5g67600	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.92	TaAffx.110167.1.S1_at	CA662870	-	-	4e+0	At4g14440	HCD1 (3-HYDROXYACYL-COA DEHYDRATASE 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.3	99.5	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
12.0	99.4	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.5	95.4	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.4	95.2	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.3	95.0	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.3	95.0	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.1	94.5	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.0	94.3	GSM298068	Leaf tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.6	92.9	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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