Co-expression analysis

Gene ID	TaAffx.85247.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g15640: cytochrome c oxidase family protein (HF=4e+0)
Module size	6 genes
NF	0.06
%ile	15.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.81	TaAffx.85247.1.S1_at	CA624417	-	-	4e+0	At3g15640	cytochrome c oxidase family protein	O.I.	H.G.	S.X.	Please select
0.10	11.3	0.94	TaAffx.51397.1.S1_at	CA725473	-	-	4e-49	At1g23490	ATARF1 (ADP-RIBOSYLATION FACTOR 1)	O.I.	H.G.	S.X.	Please select
0.07	8.6	0.92	TaAffx.120617.1.S1_at	BJ212756	-	-	4e+0	At2g39470	PPL2 (PsbP-like protein 2)	O.I.	H.G.	S.X.	Please select
0.05	6.7	0.92	TaAffx.120295.1.S1_at	BJ232977	-	-	2e+1	At5g42504	unknown protein	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.92	TaAffx.79532.1.S1_at	CA713411	-	-	3e+1	At4g02360	unknown protein	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.88	TaAffx.128414.149.S1_at	CA664567	-	-	9e-94	Atcg00490	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
18.6	99.7	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
13.5	99.5	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
10.7	99.2	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
8.5	98.9	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.6	98.7	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.6	97.8	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.3	97.6	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.8	96.0	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.8	96.0	GSM250908	Tc_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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