Co-expression analysis

Gene ID	TaAffx.85163.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g62660: GATL7 (Galacturonosyltransferase-like 7) (HF=1e-6)
Module size	6 genes
NF	0.02
%ile	5.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.75	TaAffx.85163.1.S1_at	CA622273	-	-	1e-6	At3g62660	GATL7 (Galacturonosyltransferase-like 7)	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.89	TaAffx.61585.1.A1_at	BJ261517	-	-	2e-1	At3g06490	MYB108 (myb domain protein 108)	O.I.	H.G.	S.X.	Please select
0.11	12.4	0.89	Ta.18438.1.S1_at	CA636671	-	-	1e+1	At5g21940	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.87	Ta.9666.2.S1_x_at	BJ233257	-	-	1e+0	At5g14320	30S ribosomal protein S13, chloroplast (CS13)	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.90	Ta.9247.2.S1_at	CA635085	-	-	3e-4	At4g35020	ARAC3 (ARABIDOPSIS RAC-LIKE 3)	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.90	TaAffx.77881.1.S1_at	CA741326	-	-	2e+1	Atcg00065	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
36.5	99.9	GSM324488	Si- B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
22.1	99.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
16.0	99.6	GSM324487	Si- B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
14.7	99.5	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.6	98.3	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.9	97.3	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.7	97.1	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.5	96.9	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.2	96.6	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.2	96.6	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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