Co-expression analysis

Gene ID TaAffx.85099.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g13150: unknown protein (HF=4e+0)
Module size 9 genes
NF 0.38
%ile 61.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7087.20.90TaAffx.85099.1.S1_atCA625616--4e+0At4g13150unknown proteinO.I.H.G.S.X.
0.4767.90.91TaAffx.104952.1.S1_atCA742464--5e-1At2g38780unknown proteinO.I.H.G.S.X.
0.4058.40.90TaAffx.70061.23.S1_atCA691008--9e-1At1g48605ATHAL3BO.I.H.G.S.X.
0.3651.90.92TaAffx.8084.2.S1_atCA742580--3e-2At5g02480-O.I.H.G.S.X.
0.3346.90.93Ta.974.2.S1_atCA747351--5e+0At3g28956catalytic/ nucleotide bindingO.I.H.G.S.X.
0.2735.60.93TaAffx.15154.2.S1_s_atCA744371--9e-1At3g62030peptidyl-prolyl cis-trans isomerase, chloroplast / cyclophilin / rotamase / cyclosporin A-binding protein (ROC4)O.I.H.G.S.X.
0.2329.00.93Ta.11430.1.S1_atCA637362--4e+0At4g39860unknown proteinO.I.H.G.S.X.
0.2227.10.93Ta.11182.1.A1_atCK160034--2e-4At1g68730zinc finger (DNL type) family proteinO.I.H.G.S.X.
0.2024.00.93TaAffx.105344.1.S1_atCA735840--4e-6At4g14090UDP-glucoronosyl/UDP-glucosyl transferase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.399.6GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
4.096.3GSM298091Leaf tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.395.0GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.094.3GSM138162genotype E5 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
2.994.0GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.994.0GSM298078Leaf tissue of Solstice at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.893.6GSM139923Anther telophaseI-telophaseII rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.793.3GSM298064Crown tissue of Harnesk at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.592.5GSM143491Jupateco_Lr34 (resistant), mock inoculated basal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
2.592.5GSM143492Jupateco_Lr34 (resistant), mock inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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