Co-expression analysis

Gene ID TaAffx.84901.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g73010: phosphatase (HF=1e-6)
Module size 10 genes
NF 0.10
%ile 21.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9094.80.80TaAffx.84901.1.S1_atCA627384--1e-6At1g73010phosphataseO.I.H.G.S.X.
0.4362.20.91TaAffx.9551.1.S1_atCA595241--1e+0At2g36410unknown proteinO.I.H.G.S.X.
0.1922.40.90TaAffx.111658.1.S1_s_atCA635858--2e+1At1g72175zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1314.60.90Ta.30603.2.S1_x_atCA741782--5e-9At2g36590ProT3 (PROLINE TRANSPORTER 3)O.I.H.G.S.X.
0.1112.40.90TaAffx.79610.1.S1_atCA711937--9e-1At1g26762unknown proteinO.I.H.G.S.X.
0.089.40.89RPTR-Ta-L36849-1_atRPTR-Ta-L36849-1---O.I.H.G.S.X.
0.078.60.87TaAffx.107886.1.S1_atCA693896--2e+0At5g66450phosphatidic acid phosphatase-related / PAP2-relatedO.I.H.G.S.X.
0.056.70.90TaAffx.55189.2.S1_atCA669872--9e-1At2g37950zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.056.70.90TaAffx.85934.1.S1_atCA618342--2e+1At4g28564unknown proteinO.I.H.G.S.X.
0.045.80.91TaAffx.80244.1.S1_atCA699409--4e+0At5g08060unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
23.399.8GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
13.599.5GSM143522Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
13.099.4GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.898.4GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.497.7GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.397.6GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.596.9GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.495.2GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.395.0GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.294.8GSM143515Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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