Co-expression analysis

Gene ID TaAffx.84729.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g10210: ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1) (HF=3e-1)
Module size 6 genes
NF 0.29
%ile 46.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4464.50.93TaAffx.84729.1.S1_atCA630325--3e-1At1g10210ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1)O.I.H.G.S.X.
0.4058.40.94Ta.8433.2.S1_a_atCA645972--1e-3At2g06050OPR3 (OPDA-REDUCTASE 3)O.I.H.G.S.X.
0.2939.20.93Ta.3932.1.S1_a_atCA685040--2e+1At5g23510unknown proteinO.I.H.G.S.X.
0.2735.60.94Ta.8631.2.S1_a_atCA635564--5e-9At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)O.I.H.G.S.X.
0.2329.00.94Ta.29714.2.S1_atCA608421--4e+0At4g32580thioredoxin family proteinO.I.H.G.S.X.
0.1719.80.94Ta.8488.1.S1_a_atCA637893--4e+0At4g12040zinc finger (AN1-like) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.899.7GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
17.599.7GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
17.099.6GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
12.599.4GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
10.999.3GSM139932Anther mature anthers rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
10.699.2GSM139933Anther mature anthers rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.296.6GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.996.1GSM343685Wheat var. Kennedy_control_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.294.8GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
2.793.3GSM343687Wheat var. Kennedy_Fp inoculated_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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