Co-expression analysis

Gene ID	TaAffx.84460.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g23130: SUP (SUPERMAN) (HF=6e-1)
Module size	6 genes
NF	0.32
%ile	52.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.25	32.1	0.78	TaAffx.84460.1.S1_at	CA636346	-	-	6e-1	At3g23130	SUP (SUPERMAN)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.92	Ta.4216.3.A1_at	CA615258	-	-	1e+0	At1g32400	TOM2A (TOBAMOVIRUS MULTIPLICATION 2A)	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.90	TaAffx.83004.1.S1_at	CA663511	-	-	4e+0	At4g11290	peroxidase, putative	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.93	TaAffx.27716.1.S1_at	CA671981	-	-	1e+0	At5g13870	EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4)	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.90	TaAffx.57313.1.S1_at	CA632118	-	-	1e+0	At5g44080	bZIP transcription factor family protein	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.92	TaAffx.5994.1.S1_at	CA693717	-	-	1e+1	At5g41400	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.2	99.4	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
10.4	99.2	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.1	99.0	GSM298057	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
9.0	99.0	GSM315202	target strand labeled: Sense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
7.9	98.7	GSM298058	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
6.8	98.4	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
6.1	98.1	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.8	97.2	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.5	96.9	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.2	96.6	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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