Co-expression analysis

Gene ID TaAffx.84150.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g49700: ACS9 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9) (HF=1e+0)
Module size 13 genes
NF 0.59
%ile 84.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7790.80.92TaAffx.84150.1.S1_atCA643746--1e+0At3g49700ACS9 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9)O.I.H.G.S.X.
0.7288.30.96Ta.24654.1.S1_atCA605778--2e+1At2g02960zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.6986.90.95TaAffx.64654.1.A1_atBJ283114--4e+0At5g57180CIA2 (CHLOROPLAST IMPORT APPARATUS 2)O.I.H.G.S.X.
0.6483.60.96Ta.1876.1.S1_x_atBE443006--2e-2At4g38680GRP2 (GLYCINE RICH PROTEIN 2)O.I.H.G.S.X.
0.6383.10.95Ta.1876.1.S1_s_atBE443006--2e-2At4g38680GRP2 (GLYCINE RICH PROTEIN 2)O.I.H.G.S.X.
0.6282.30.94TaAffx.30033.2.S1_atCA630062--1e+1At5g50820anac097 (Arabidopsis NAC domain containing protein 97)O.I.H.G.S.X.
0.6182.00.95Ta.8935.1.A1_atBQ162653--3e+0At1g09310unknown proteinO.I.H.G.S.X.
0.5879.20.96TaAffx.86395.1.S1_atCA609466--4e+0At5g06500AGL96 (AGAMOUS-LIKE 96)O.I.H.G.S.X.
0.5678.60.97TaAffx.25423.1.S1_atCA700288--4e+0At4g37810unknown proteinO.I.H.G.S.X.
0.5374.90.96Ta.26125.1.S1_atCD452833--1e+0At4g38680GRP2 (GLYCINE RICH PROTEIN 2)O.I.H.G.S.X.
0.4969.70.96Ta.1576.1.S1_atBE443977--5e+0At5g35290unknown proteinO.I.H.G.S.X.
0.4159.60.95Ta.1783.1.S1_atBQ162798--2e-1At1g38630unknown proteinO.I.H.G.S.X.
0.3651.90.95Ta.943.1.A1_x_atCK196795--6e+0Atcg00660-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.199.8GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
21.199.7GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
17.499.6GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
16.899.6GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
13.299.5GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
12.499.4GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
7.698.7GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
4.296.6GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.296.6GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.294.8GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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