Co-expression analysis

Gene ID TaAffx.84143.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g05070: unknown protein (HF=2e+1)
Module size 7 genes
NF 0.10
%ile 22.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5273.70.96TaAffx.84143.1.S1_atCA714749--2e+1At4g05070unknown proteinO.I.H.G.S.X.
0.2939.20.96Ta.5102.1.S1_atCK171554--2e+0At5g07600oleosin / glycine-rich proteinO.I.H.G.S.X.
0.1719.80.96Ta.6824.1.S1_x_atCD891260--1e-14At5g14040mitochondrial phosphate transporterO.I.H.G.S.X.
0.1415.80.96TaAffx.119135.1.S1_x_atAJ615948--3e+0At5g26717-O.I.H.G.S.X.
0.1213.30.96Ta.16223.1.S1_atCA602882--4e+0At3g60966protein binding / zinc ion bindingO.I.H.G.S.X.
0.1011.30.96TaAffx.38158.4.S1_x_atCA630021--1e-3At2g44330zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.045.80.96Ta.359.3.S1_x_atCA685131--2e-1At3g28140calmodulin-binding proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.599.1GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.998.0GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.397.6GSM298094Crown tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.197.5GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.596.9GSM298073Crown tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.296.6GSM314270tissue type: immature inflorescence - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.996.1GSM298071Crown tissue of Paragon at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.896.0GSM298072Crown tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.595.4GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.595.4GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, ZmAffx.821.1.A1_at, orthologous to the query gene, TaAffx.84143.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9499.5ZmAffx.821.1.A1_atAt4g05070--3e+0At3g21840ASK7 (ARABIDOPSIS SKP1-LIKE 7)O.I.H.G.S.X.
0.6582.1Zm.1482.2.A1_atAt4g05070hypothetical protein LOC100279242-7e+0At5g17280unknown proteinO.I.H.G.S.X.
0.5571.6Zm.4471.3.A1_x_atAt4g05070pyruvate, orthophosphate dikinase1-6e+0At2g36895unknown proteinO.I.H.G.S.X.
0.4961.9Zm.2041.1.A1_atAt4g05070hypothetical protein LOC100191381-3e-3At4g24770RBP31 (31-KDA RNA BINDING PROTEIN)O.I.H.G.S.X.
0.4759.9Zm.9975.1.A1_atAt4g05070--7e-6At5g64200ATSC35O.I.H.G.S.X.
0.4048.5Zm.18816.1.A1_atAt4g05070indole-3-acetate beta-glucosyltransferase-1e+0At4g33730pathogenesis-related protein, putativeO.I.H.G.S.X.
0.3945.6Zm.3780.3.S1_atAt4g05070--2e+0At1g29720protein kinase family proteinO.I.H.G.S.X.
0.3538.9Zm.19250.1.S1_atAt4g05070--3e-12At4g24740AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 2)O.I.H.G.S.X.
0.3131.6Zm.6454.1.A1_atAt4g05070PP1/PP2A phosphatases pleiotropic regulator PRL1-9e-29At4g15900PRL1 (PLEIOTROPIC REGULATORY LOCUS 1)O.I.H.G.S.X.
0.3029.8Zm.628.1.A1_atAt4g05070glutathione S-transferase12-6e-1At3g21960-O.I.H.G.S.X.
0.3029.8Zm.13763.1.A1_atAt4g05070hypothetical protein LOC100279845-2e-4At4g386901-phosphatidylinositol phosphodiesterase-relatedO.I.H.G.S.X.
0.2724.6Zm.5280.1.S1_atAt4g05070--2e-8At1g76760ATY1 (ARABIDOPSIS THIOREDOXIN Y1)O.I.H.G.S.X.
0.2724.6Zm.1056.1.S1_atAt4g05070ribosomal protein S22 homolog-3e-17At5g6230040S ribosomal protein S20 (RPS20C)O.I.H.G.S.X.
0.2419.8Zm.3699.5.A1_atAt4g05070--3e-2At5g09995unknown proteinO.I.H.G.S.X.
0.2419.8Zm.2810.1.S1_atAt4g05070calcitonin peptide-receptor component protein-7e-1At1g18170immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinO.I.H.G.S.X.
0.2216.9Zm.2094.1.S1_atAt4g05070hypothetical protein LOC100192908-8e-19At2g36060ubiquitin-conjugating enzyme family proteinO.I.H.G.S.X.
0.1912.8Zm.2016.1.S1_atAt4g05070zinc finger, C3HC4 type family protein-2e+0At5g51195unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera



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