Co-expression analysis

Gene ID TaAffx.84143.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g05070: unknown protein (HF=2e+1)
Module size 7 genes
NF 0.10
%ile 22.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5273.70.96TaAffx.84143.1.S1_atCA714749--2e+1At4g05070unknown proteinO.I.H.G.S.X.
0.2939.20.96Ta.5102.1.S1_atCK171554--2e+0At5g07600oleosin / glycine-rich proteinO.I.H.G.S.X.
0.1719.80.96Ta.6824.1.S1_x_atCD891260--1e-14At5g14040mitochondrial phosphate transporterO.I.H.G.S.X.
0.1415.80.96TaAffx.119135.1.S1_x_atAJ615948--3e+0At5g26717-O.I.H.G.S.X.
0.1213.30.96Ta.16223.1.S1_atCA602882--4e+0At3g60966protein binding / zinc ion bindingO.I.H.G.S.X.
0.1011.30.96TaAffx.38158.4.S1_x_atCA630021--1e-3At2g44330zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.045.80.96Ta.359.3.S1_x_atCA685131--2e-1At3g28140calmodulin-binding proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.599.1GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.998.0GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.397.6GSM298094Crown tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.197.5GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.596.9GSM298073Crown tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.296.6GSM314270tissue type: immature inflorescence - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.996.1GSM298071Crown tissue of Paragon at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.896.0GSM298072Crown tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.595.4GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.595.4GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1617677_at, orthologous to the query gene, TaAffx.84143.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5577.31617677_atAt4g05070hypothetical protein LOC100260994-2e-1At3g48890ATMP2O.I.H.G.S.X.
0.7792.31620866_atAt4g05070hypothetical protein LOC100245423-6e-2At5g38400unknown proteinO.I.H.G.S.X.
0.4361.51607335_atAt4g05070hypothetical protein LOC100245908-1e-20At3g06050PRXIIF (PEROXIREDOXIN IIF)O.I.H.G.S.X.
0.3345.71618263_atAt4g05070hypothetical protein LOC100252374-7e-21At4g17830peptidase M20/M25/M40 family proteinO.I.H.G.S.X.
0.3039.41620947_atAt4g05070hypothetical protein LOC100257258-8e-47At5g53850haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.1819.41614839_s_atAt4g05070hypothetical protein LOC100251023-3e-10At1g04290thioesterase family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Zea_mays



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