Co-expression analysis

Gene ID TaAffx.83997.1.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At5g56610: dual specificity protein phosphatase family protein (HF=3e-2)
Module size 14 genes
NF 0.46
%ile 71.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8493.60.94TaAffx.83997.1.S1_x_atCA646607--3e-2At5g56610dual specificity protein phosphatase family proteinO.I.H.G.S.X.
0.5374.90.97Ta.2207.2.S1_a_atCA612248--5e-25At5g05780RPN8A (RP NON-ATPASE SUBUNIT 8A)O.I.H.G.S.X.
0.5273.70.96Ta.3159.1.S1_atBJ228678--5e+0At4g27880seven in absentia (SINA) family proteinO.I.H.G.S.X.
0.5072.40.96Ta.9377.3.S1_atCA599079--6e+0At5g63310NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)O.I.H.G.S.X.
0.5072.40.96Ta.7274.3.S1_a_atAJ612375--1e-3At1g79650RAD23O.I.H.G.S.X.
0.4869.00.96Ta.30799.3.S1_a_atCA720672--6e-2At5g54580RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.4464.50.96Ta.4504.3.S1_atBJ208637--1e-3At1g17520DNA-binding protein, putativeO.I.H.G.S.X.
0.4260.90.97TaAffx.91476.1.S1_atBJ316914--7e-5At3g17590BSH (BUSHY GROWTH)O.I.H.G.S.X.
0.4058.40.96Ta.7506.2.S1_a_atBJ267303--5e-15At1g27650ATU2AF35AO.I.H.G.S.X.
0.3651.90.97Ta.1286.2.S1_x_atBQ606415--4e+0At5g61412unknown proteinO.I.H.G.S.X.
0.3651.90.96Ta.6000.2.S1_a_atCA597404--4e+0At5g53000TAP46 (2A phosphatase associated protein of 46 kD)O.I.H.G.S.X.
0.3040.90.96Ta.7537.2.S1_a_atCA648066--1e+0At5g22390unknown proteinO.I.H.G.S.X.
0.2329.00.97TaAffx.87003.1.S1_s_atCA597427--4e-3At4g19150ankyrin repeat family proteinO.I.H.G.S.X.
0.2024.00.97Ta.14364.3.S1_x_atBJ216082--7e-12At1g17130cell cycle control protein-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.898.4GSM314285tissue type: 22 DAP embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
6.198.1GSM314284tissue type: 22 DAP embryo - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
6.198.1GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.495.2GSM298083Crown tissue of Solstice at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.395.0GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.395.0GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.194.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.994.0GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
2.893.6GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.893.6GSM298054Leaf tissue of Harnesk at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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