Co-expression analysis

Gene ID	TaAffx.83853.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g25220: FKBP15-1 (HF=4e+0)
Module size	6 genes
NF	0.27
%ile	45.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	83.1	0.96	TaAffx.83853.1.S1_at	CA649565	-	-	4e+0	At3g25220	FKBP15-1	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.97	Ta.3065.3.S1_a_at	CA654472	-	-	2e-11	At2g24765	ARF3 (ADP-RIBOSYLATION FACTOR 3)	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.97	Ta.7714.3.S1_a_at	CA638977	-	-	1e+0	At1g16700	NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial, putative	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.97	Ta.9638.2.S1_a_at	CA661653	-	-	1e-3	At1g34350	unknown protein	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.96	Ta.14395.2.S1_a_at	CA652559	-	-	2e+0	At1g79650	RAD23	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.96	Ta.12576.2.S1_a_at	BJ300510	-	-	4e+0	At5g62350	invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.9	98.4	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
5.3	97.6	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.3	95.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.2	94.8	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.0	94.3	GSM138193	genotype B33 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.7	93.3	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.7	93.3	GSM139929	Anther immature pollen rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.7	93.3	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.5	92.5	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.4	92.0	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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