Co-expression analysis

Gene ID TaAffx.83768.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g60340: maoC-like dehydratase domain-containing protein (HF=5e-1)
Module size 6 genes
NF 0.62
%ile 87.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.90TaAffx.83768.1.S1_atCA651516--5e-1At5g60340maoC-like dehydratase domain-containing proteinO.I.H.G.S.X.
0.7389.10.89Ta.23020.1.S1_x_atCA722449--2e+1At4g02860catalyticO.I.H.G.S.X.
0.6786.30.89Ta.30399.1.A1_atCK199497--6e+0At5g29050unknown proteinO.I.H.G.S.X.
0.6081.00.90TaAffx.9215.1.S1_atCA607381--1e+1At5g66320zinc finger (GATA type) family proteinO.I.H.G.S.X.
0.4666.80.90Ta.6001.2.S1_atCA622286--9e-3At3g05070-O.I.H.G.S.X.
0.3854.70.90TaAffx.111174.1.S1_atCA646654--1e+0At1g11570nuclear transport factor 2 (NTF2), putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
46.699.9GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
15.099.6GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.298.1GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
4.596.9GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.896.0GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.395.0GSM343687Wheat var. Kennedy_Fp inoculated_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.395.0GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.395.0GSM314272tissue type: floral bracts, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.294.8GSM343686Wheat var. Kennedy_Fp inoculated_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.294.8GSM139923Anther telophaseI-telophaseII rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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