Co-expression analysis

Gene ID	TaAffx.83169.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g38090: unknown protein (HF=4e-1)
Module size	9 genes
NF	0.35
%ile	56.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.70	87.2	0.94	TaAffx.83169.1.S1_at	CD872467	-	-	4e-1	At4g38090	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.96	TaAffx.64619.1.S1_at	BJ285816	-	-	2e-3	At1g29720	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.96	Ta.4302.2.A1_a_at	CA651636	-	-	4e-22	At1g30120	PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA)	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.96	TaAffx.67799.1.S1_at	BE516875	-	-	2e+1	At5g55460	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.95	Ta.8476.1.S1_a_at	BQ161954	-	-	1e+0	At1g72680	cinnamyl-alcohol dehydrogenase, putative	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.96	Ta.4302.2.A1_x_at	CA651636	-	-	4e-22	At1g30120	PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA)	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.95	Ta.28815.1.A1_at	BQ169565	-	-	2e-1	At3g61980	serine protease inhibitor, Kazal-type family protein	O.I.	H.G.	S.X.	Please select
0.30	40.9	0.95	Ta.8476.2.S1_at	CA727685	-	-	1e-1	At1g80120	unknown protein	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.95	Ta.10534.1.S1_a_at	CA676692	-	-	4e-1	At4g11485	LCR11 (Low-molecular-weight cysteine-rich 11)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.2	98.5	GSM298066	Leaf tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
6.6	98.3	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.3	98.2	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.7	97.9	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.2	97.5	GSM314266	tissue type: seedling, leaf - rep1	GSE12508	Transcription patterns during wheat development
3.4	95.2	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.0	94.3	GSM143518	Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.0	94.3	GSM143508	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.0	94.3	GSM143517	Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.9	94.0	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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