Co-expression analysis

Gene ID TaAffx.82957.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g01990: ACR6 (HF=7e-2)
Module size 34 genes
NF 0.32
%ile 51.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8794.20.91TaAffx.82957.1.S1_atCA664385--7e-2At3g01990ACR6O.I.H.G.S.X.
0.6383.10.95TaAffx.97951.1.S1_atCA485362--4e-10At5g13410immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinO.I.H.G.S.X.
0.5979.80.96Ta.4991.1.S1_a_atCK215951--6e-1At2g15740zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.5879.20.95Ta.4922.2.S1_atBJ268998--7e-2At3g61080fructosamine kinase family proteinO.I.H.G.S.X.
0.5475.50.96Ta.4991.1.S1_x_atCK215951--6e-1At2g15740zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.5273.70.96Ta.10085.1.S1_x_atBQ171616--2e-1At3g13740URF 4-relatedO.I.H.G.S.X.
0.4969.70.95Ta.4991.3.S1_atCA626830--1e+0At5g60330unknown proteinO.I.H.G.S.X.
0.4767.90.96Ta.12206.1.S1_atCK151735--6e-13At1g73060unknown proteinO.I.H.G.S.X.
0.4767.90.96Ta.4991.1.S1_atCK215951--6e-1At2g15740zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.4565.20.95Ta.6356.2.S1_atBJ258619--2e-25At4g34830-O.I.H.G.S.X.
0.4565.20.93TaAffx.82888.1.S1_atCA662336--4e-1At5g37640UBQ9O.I.H.G.S.X.
0.4464.50.96TaAffx.106597.1.S1_atBJ211813--1e+0At3g58120BZIP61O.I.H.G.S.X.
0.4464.50.96Ta.4991.3.S1_x_atCA626830--1e+0At5g60330unknown proteinO.I.H.G.S.X.
0.4260.90.95Ta.29329.1.S1_atCD874029--5e-6At1g17650GLYR2 (GLYOXYLATE REDUCTASE 2)O.I.H.G.S.X.
0.4260.90.95TaAffx.32198.1.S1_atCA599280--4e+0At5g53490thylakoid lumenal 17.4 kDa protein, chloroplastO.I.H.G.S.X.
0.3753.00.96Ta.9139.2.S1_atCA636063--1e-48At2g18710SCY1 (SecY Homolog 1)O.I.H.G.S.X.
0.3753.00.95Ta.22426.3.S1_atCA622182--4e+0At3g59600NRPB8BO.I.H.G.S.X.
0.3651.90.96Ta.12206.2.S1_atCA616979--5e-1At5g55750hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.3244.40.94Ta.2381.3.S1_x_atCA715238--3e+0At1g61200homeobox-leucine zipper protein-relatedO.I.H.G.S.X.
0.3142.70.96Ta.2431.2.S1_x_atBG905681--2e+1At5g14970unknown proteinO.I.H.G.S.X.
0.3142.70.96TaAffx.13595.3.S1_atCA743661--7e+0At3g02980GCN5-related N-acetyltransferase (GNAT) family proteinO.I.H.G.S.X.
0.3040.90.95TaAffx.121177.1.S1_atCA732736--3e-11At2g30390FC2 (FERROCHELATASE 2)O.I.H.G.S.X.
0.2839.20.94TaAffx.84638.1.S1_x_atCA632541--7e-2At3g13227serine-rich protein-relatedO.I.H.G.S.X.
0.2839.20.96TaAffx.59616.1.S1_x_atCA597989--1e+1At5g4770060S acidic ribosomal protein P1 (RPP1C)O.I.H.G.S.X.
0.2532.10.97Ta.12375.1.A1_s_atBQ172208--1e-7At1g32070ATNSI (NUCLEAR SHUTTLE INTERACTING)O.I.H.G.S.X.
0.2227.10.93TaAffx.113828.1.S1_atCA604282--3e-1At2g05330speckle-type POZ protein-relatedO.I.H.G.S.X.
0.2227.10.96Ta.27864.1.S1_atCD880477--7e-15At3g10060immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putativeO.I.H.G.S.X.
0.2227.10.96Ta.7763.1.S1_atCA681423--6e-7At4g29590methyltransferaseO.I.H.G.S.X.
0.2227.10.96Ta.23665.1.S1_atX14348.1ADP-glucose pyrophosophorylase-4e-23At5g19220APL1 (ADP GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 1)O.I.H.G.S.X.
0.1922.40.96Ta.28818.1.S1_atCA618617--6e-1Atcg00670-O.I.H.G.S.X.
0.1517.10.95Ta.2431.1.S1_x_atBG905732--4e-5At3g48420haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.1517.10.93TaAffx.112042.1.S1_atCA687270--1e-3At3g10405unknown proteinO.I.H.G.S.X.
0.1415.80.95Ta.9510.1.S1_x_atBJ254552--2e+0At4g25570ACYB-2O.I.H.G.S.X.
0.1213.30.95Ta.23163.1.A1_atCK216129--3e-1At1g06770DRIP1 (DREB2A-INTERACTING PROTEIN 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.798.7GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.298.5GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.098.5GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
6.998.4GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.398.2GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.298.1GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.098.0GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.896.0GSM324493Si+ B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
3.695.6GSM324489Si- B+ rep3GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
3.595.4GSM143526Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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