Co-expression analysis

Gene ID TaAffx.8213.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g68530: KCS6 (3-KETOACYL-COA SYNTHASE 6) (HF=8e-1)
Module size 6 genes
NF 0.61
%ile 86.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.97TaAffx.8213.1.S1_atCA631501--8e-1At1g68530KCS6 (3-KETOACYL-COA SYNTHASE 6)O.I.H.G.S.X.
0.8092.20.98Ta.22770.1.S1_atCK200775--2e+0At5g130505-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE)O.I.H.G.S.X.
0.6786.30.97Ta.16296.1.S1_atCA604223--9e+0At5g07560GRP20 (GLYCINE-RICH PROTEIN 20)O.I.H.G.S.X.
0.5678.60.98Ta.29418.1.A1_atBJ283945--1e+0At5g14180MPL1 (MYZUS PERSICAE-INDUCED LIPASE 1)O.I.H.G.S.X.
0.4666.80.98Ta.16942.1.S1_a_atCA615566--4e+0At1g05136unknown proteinO.I.H.G.S.X.
0.3346.90.98Ta.8869.1.S1_atBQ162539--9e-1At2g04864unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.399.7GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
15.899.6GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
8.898.9GSM139930Anther immature pollen rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
8.598.9GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.298.5GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
6.398.2GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.697.8GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.697.8GSM139926Anther tetrads rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.596.9GSM139923Anther telophaseI-telophaseII rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.296.6GSM298089Leaf tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage