Co-expression analysis

Gene ID	TaAffx.81795.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g57320: villin, putative (HF=2e-4)
Module size	11 genes
NF	0.63
%ile	87.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.96	TaAffx.81795.1.S1_at	CA644276	-	-	2e-4	At5g57320	villin, putative	O.I.	H.G.	S.X.	Please select
0.83	93.4	0.97	Ta.14195.3.S1_a_at	CA640695	-	-	4e+0	At4g34450	coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative	O.I.	H.G.	S.X.	Please select
0.72	88.3	0.96	Ta.1931.2.S1_a_at	CA610152	-	-	1e+0	At3g29720	transferase-related	O.I.	H.G.	S.X.	Please select
0.70	87.2	0.97	Ta.14195.3.S1_x_at	CA640695	-	-	4e+0	At4g34450	coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.97	Ta.23734.3.S1_a_at	CA605815	-	-	1e+0	At5g23405	high mobility group (HMG1/2) family protein	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.96	Ta.23734.3.S1_x_at	CA605815	-	-	1e+0	At5g23405	high mobility group (HMG1/2) family protein	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.97	TaAffx.56992.1.S1_at	CA638685	-	-	3e-4	At1g30450	CCC1 (CATION-CHLORIDE CO-TRANSPORTER 1)	O.I.	H.G.	S.X.	Please select
0.56	78.6	0.97	Ta.6867.2.S1_a_at	BJ263192	-	-	3e-4	At3g61050	NTMC2T4	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.97	Ta.3584.2.S1_a_at	CA601548	-	-	1e+0	At5g25102	unknown protein	O.I.	H.G.	S.X.	Please select
0.45	65.2	0.97	Ta.6867.3.A1_a_at	BJ228637	-	-	1e+0	At1g17147	-	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.97	TaAffx.114677.1.S1_at	CA659671	-	-	1e-8	At2g41620	nucleoporin interacting component family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.0	96.3	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.9	94.0	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.6	92.9	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.5	92.5	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.4	92.0	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
2.3	91.5	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.3	91.5	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
2.2	91.0	GSM111185	genotype C22 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.2	91.0	GSM298085	Crown tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.1	90.3	GSM139916	Anther leptotene-pachytene rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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