Co-expression analysis

Gene ID TaAffx.81595.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g61610: - (HF=1e+0)
Module size 10 genes
NF 0.38
%ile 60.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9599.10.99TaAffx.81595.1.S1_atCA684192--1e+0At5g61610-O.I.H.G.S.X.
0.6081.01.00TaAffx.108373.1.S1_atCA689084--4e+0At5g62020AT-HSFB2AO.I.H.G.S.X.
0.5979.81.00TaAffx.108546.1.S1_atCA689075--4e+0At2g43745-O.I.H.G.S.X.
0.5779.21.00TaAffx.81322.1.S1_atCA687527--9e-1At5g54070AT-HSFA9O.I.H.G.S.X.
0.5072.41.00TaAffx.108661.1.S1_atCA685694--2e-11At3g2339060S ribosomal protein L36a/L44 (RPL36aA)O.I.H.G.S.X.
0.4464.51.00TaAffx.107944.1.S1_s_atCA693029--1e+1At5g64650ribosomal protein L17 family proteinO.I.H.G.S.X.
0.4058.41.00TaAffx.54362.1.S1_atCA678983--2e+1At5g42420transporter-relatedO.I.H.G.S.X.
0.2125.51.00TaAffx.108275.1.S1_atCA687860--9e-2At5g20010RAN-1O.I.H.G.S.X.
0.2125.51.00TaAffx.108262.1.S1_atCA690302--3e-1At2g21040C2 domain-containing proteinO.I.H.G.S.X.
0.1415.81.00TaAffx.107998.1.S1_atCA692541--2e+1At3g1009040S ribosomal protein S28 (RPS28A)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
85.8100.0GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
75.7100.0GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
8.798.9GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
7.498.6GSM324489Si- B+ rep3GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
4.196.4GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.196.4GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.595.4GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.595.4GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.194.5GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.793.3GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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