Co-expression analysis

Gene ID	TaAffx.81300.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g25510: unknown protein (HF=9e-1)
Module size	6 genes
NF	0.08
%ile	19.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.30	40.9	0.73	TaAffx.81300.1.S1_at	CA687684	-	-	9e-1	At2g25510	unknown protein	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.85	Ta.27570.1.S1_at	CD899311	-	-	3e-9	At3g50660	DWF4 (DWARF 4)	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.90	Ta.20981.1.S1_at	CA645417	-	-	2e-7	At4g33910	oxidoreductase, 2OG-Fe(II) oxygenase family protein	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.85	TaAffx.15828.1.S1_at	BQ803483	-	-	3e+0	At4g19270	unknown protein	O.I.	H.G.	S.X.	Please select
0.04	5.8	0.78	Ta.11411.1.A1_at	BQ170044	-	-	4e+0	At1g21010	unknown protein	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.82	Ta.13145.1.S1_at	BQ166665	-	-	7e-7	At2g02180	TOM3	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.1	99.4	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
8.7	98.9	GSM143509	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.0	98.0	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
5.1	97.5	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.6	97.0	GSM314264	tissue type: seedling, crown - rep2	GSE12508	Transcription patterns during wheat development
4.5	96.9	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4	96.8	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
4.0	96.3	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
4.0	96.3	GSM143515	Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.0	96.3	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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