Co-expression analysis

Gene ID TaAffx.81079.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g06160: ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59) (HF=6e-2)
Module size 6 genes
NF 0.09
%ile 20.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.81TaAffx.81079.1.S1_atCA689720--6e-2At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)O.I.H.G.S.X.
0.2125.50.94TaAffx.62788.1.S1_atBQ606815--4e+0At1g71780unknown proteinO.I.H.G.S.X.
0.1011.30.94TaAffx.119601.1.S1_atBJ266980--9e+0At5g59950RNA and export factor-binding protein, putativeO.I.H.G.S.X.
0.0910.40.94TaAffx.7846.1.S1_atCA647264--2e+1At5g15670F-box family proteinO.I.H.G.S.X.
0.045.80.94TaAffx.118620.1.S1_atBJ316617--1e+0At2g31560unknown proteinO.I.H.G.S.X.
0.045.80.93Ta.6759.2.S1_x_atBJ211299--2e+0At5g63310NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.299.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
10.299.2GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
9.499.1GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
9.499.1GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
9.099.0GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
8.098.8GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.698.7GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.397.6GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.596.9GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.296.6GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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