Co-expression analysis

Gene ID	TaAffx.80736.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g12244: DNA binding / hydrolase, acting on ester bonds / nuclease/ nucleic acid binding / recombinase (HF=5e-1)
Module size	6 genes
NF	0.49
%ile	75.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	81.0	0.95	TaAffx.80736.1.S1_at	CA693340	-	-	5e-1	At1g12244	DNA binding / hydrolase, acting on ester bonds / nuclease/ nucleic acid binding / recombinase	O.I.	H.G.	S.X.	Please select
0.83	93.4	0.93	TaAffx.39136.1.S1_at	BI751952	-	-	3e-17	At1g02260	transmembrane protein, putative	O.I.	H.G.	S.X.	Please select
0.83	93.4	0.94	Ta.21321.1.S1_s_at	CA670356	-	-	1e+0	At2g20750	ATEXPB1 (ARABIDOPSIS THALIANA EXPANSIN B1)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.95	Ta.21321.1.S1_at	CA670356	-	-	1e+0	At2g20750	ATEXPB1 (ARABIDOPSIS THALIANA EXPANSIN B1)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.94	TaAffx.107530.1.S1_at	AL827998	-	-	1e+0	At5g48370	thioesterase family protein	O.I.	H.G.	S.X.	Please select
0.14	15.8	0.94	Ta.1364.1.S1_at	BJ219908	geranylgeranyl hydrogenase	-	4e-6	At1g74470	geranylgeranyl reductase	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.6	98.3	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
6.1	98.1	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
6.0	98.0	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.1	97.5	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.7	97.1	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.6	97.0	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.2	96.6	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.1	96.4	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.8	96.0	GSM250888	TcLr34_3dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.7	95.8	GSM250886	TcLr1_3dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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