Co-expression analysis

Gene ID TaAffx.80244.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g08060: unknown protein (HF=4e+0)
Module size 18 genes
NF 0.36
%ile 57.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7690.10.92TaAffx.80244.1.S1_atCA699409--4e+0At5g08060unknown proteinO.I.H.G.S.X.
0.6182.00.94TaAffx.80668.1.S1_atCA694164--1e+0At5g4770060S acidic ribosomal protein P1 (RPP1C)O.I.H.G.S.X.
0.5879.20.94Ta.11314.2.S1_x_atCA619157--4e+0At5g40500unknown proteinO.I.H.G.S.X.
0.5779.20.94TaAffx.15602.1.S1_atBG909974--3e+0Atmg01350-O.I.H.G.S.X.
0.5173.00.94TaAffx.108775.1.S1_atCA684251--3e+0At5g47570unknown proteinO.I.H.G.S.X.
0.5072.40.94TaAffx.99206.1.S1_atCA727631--3e-1At4g21610LOL2 (LSD ONE LIKE 2)O.I.H.G.S.X.
0.4767.90.93TaAffx.5086.1.S1_atCA723258--5e-2At3g50550unknown proteinO.I.H.G.S.X.
0.4565.20.95TaAffx.113756.1.S1_atCA605644--1e-3At5g04250OTU-like cysteine protease family proteinO.I.H.G.S.X.
0.4464.50.93Ta.25522.2.S1_x_atCA683586--2e-1At4g13560UNE15 (unfertilized embryo sac 15)O.I.H.G.S.X.
0.4464.50.94TaAffx.51452.1.S1_x_atCA724758--1e+1At5g56369-O.I.H.G.S.X.
0.4260.90.93TaAffx.114332.1.S1_atCA594773--2e+0At1g67950RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.4058.40.94TaAffx.38217.1.S1_x_atBJ244494--7e+0At5g11690ATTIM17-3O.I.H.G.S.X.
0.3448.10.93TaAffx.113218.1.S1_atCA617187--5e-3At5g42050-O.I.H.G.S.X.
0.3346.90.93TaAffx.5521.1.S1_atCA708179--3e+0At1g13960WRKY4O.I.H.G.S.X.
0.2735.60.95Ta.5523.2.S1_a_atBJ243328--4e+0At5g47600heat shock protein-relatedO.I.H.G.S.X.
0.2329.00.94TaAffx.66587.1.S1_atBG909343--2e+0At1g02620GTP-binding protein (SAR1A)O.I.H.G.S.X.
0.1922.40.93TaAffx.44134.1.S1_atCA596006P34cdc2-4e+0At1g61920unknown proteinO.I.H.G.S.X.
0.1112.40.93Ta.27754.1.S1_a_atCD883562--2e-3At3g45960ATEXLA3 (arabidopsis thaliana expansin-like a3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.798.9GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
7.598.6GSM139926Anther tetrads rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
7.298.5GSM139930Anther immature pollen rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
6.598.3GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.098.0GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.197.5GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.097.4GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.697.0GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.596.9GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.196.4GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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